16S rDNA amplicon sequencing of sample PS003 - SRA

SRX3065348: 16S rDNA amplicon sequencing of sample PS003
1 ILLUMINA (Illumina MiSeq) run: 127,372 spots, 76.7M bases, 39Mb downloads

Design: 16S rDNA amplicon sequencing, primers 357f (5'-CCTACgggAggCAgCAg-3') and 926r (5'-CCGTCAATTCMTTTRAgTTT-3') ,sequenced at 2x300 cycles

Submitted by: Mayo Clinic

Study: Gut metagenomes of patients with colorectal cancer

PRJNA397219 • SRP114892 • All experiments • All runs

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We sequenced the gut metagenomes of patients with colorectal cancer, together age- and sex-matched controls. Our goal is to analyze their taxonomic and functional profiles, as well as reconstruct bacterial and archaeal genomes of interest, related to the microbial metabolic toxicity that may be driving colorectal cancer progression.

Sample:

SAMN07452477 • SRS2409831 • All experiments • All runs

Organism: human gut metagenome

Library:

Name: PS003

Instrument: Illumina MiSeq

Strategy: AMPLICON

Source: METAGENOMIC

Selection: PCR

Layout: PAIRED

Runs: 1 run, 127,372 spots, 76.7M bases, 39Mb

Run	# of Spots	# of Bases	Size	Published
SRR5903764	127,372	76.7M	39Mb	2017-08-06

ID:: 4349623

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